The use of RECON/PEST software and electron density-derived descriptors for virtual high throughput database screening and refinement

4/13/02


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Table of Contents

The use of RECON/PEST software and electron density-derived descriptors for virtual high throughput database screening and refinement

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RECON Main Screen

Configure Panel – Input Menu

Interactive SMILES Input

RECON with SMILES input

File selection example – mol2

File list panel after file selection

Transferable Atom Equivalents

Atomtyper assignment algorithm

Theory of

The TAE atomic surfaces

TAE Descriptors

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Electron Density-Derived Descriptors

Electron Density Derived Descriptors

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Wavelet Decomposition

Electron Density-Derived Molecular Properties: Wavelet Coefficient Descriptors (WCD)

output

review

Timing performance

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Probe Proteins

Protein Retention Modeling & Prediction

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PEST descriptors

Benzene Electrostatic Potential

Benzene Politzer Ionization Potential

Benzene Kinetic Energy K and Laplacian ???

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SVM regression

Data Analysis Technique

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SMUT preview

Summary

Acknowledgements

Author: N. Sukumar

Email: brenec@rpi.edu

Home Page: http://www.drugmining.com